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van Dijk, Inge; Bernhard, Joan M; de Nooijer, Lennart Jan; Nehrke, Gernot; Wit, Johannes C; Reichart, Gert-Jan (2017): Seawater carbonate chemistry and survival and growth of four agglutinating foraminifera [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.923815

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Abstract:
Agglutinated foraminifera create a shell by assembling particles from the sediment and comprise a significant part of the foraminiferal fauna. Despite their high abundance and diversity, their response to environmental perturbations and climate change is relatively poorly studied. Here we present results from a culture experiment with four different species of agglutinating foraminifera incubated in artificial substrate and exposed to different pCO2 conditions, in either dysoxic or oxic settings. We observed species-specific reactions (i.e., reduced or increased chamber formation rates) to dysoxia and/or acidification. While chamber addition and/or survival rates of Miliammina fusca and Trochammina inflata were negatively impacted by either dysoxia or acidification, respectively, Textularia tenuissima and Spiroplectammina biformis had the highest survivorship and chamber addition rates with combined high pCO2 (2000 ppm) and low O2 (0.7 ml/l) conditions. The differential response of these species indicates that not all agglutinating foraminifera are well-adapted to conditions induced by predicted climate change, which may result in a shift in foraminiferal community composition.
Keyword(s):
Benthos; Bottles or small containers/Aquaria (<20 L); Chromista; Coast and continental shelf; Foraminifera; Growth/Morphology; Heterotrophic prokaryotes; Laboratory experiment; Miliammina fusca; Mortality/Survival; North Pacific; Oxygen; Single species; Species interaction; Spiroplectammina biformis; Temperate; Textularia tenuissima; Trochammina inflata
Supplement to:
van Dijk, Inge; Bernhard, Joan M; de Nooijer, Lennart Jan; Nehrke, Gernot; Wit, Johannes C; Reichart, Gert-Jan (2017): Combined impacts of ocean acidification and dysoxia on survival and growth of four agglutinating foraminifera. Journal of Foraminiferal Research, 47(3), 294-303, https://doi.org/10.2113/gsjfr.47.3.294
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb
Project(s):
Ocean Acidification International Coordination Centre (OA-ICC)
Coverage:
Latitude: 41.000000 * Longitude: -70.000000
Date/Time Start: 2013-05-01T00:00:00 * Date/Time End: 2013-05-31T00:00:00
Event(s):
Mudpatch * Latitude: 41.000000 * Longitude: -70.000000 * Date/Time Start: 2013-05-01T00:00:00 * Date/Time End: 2013-05-31T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-09-27.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypevan Dijk, Ingestudy
2SpeciesSpeciesvan Dijk, Inge
3Registration number of speciesReg spec novan Dijk, Inge
4Uniform resource locator/link to referenceURL refvan Dijk, IngeWoRMS Aphia ID
5TreatmentTreatvan Dijk, Inge
6Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmvan Dijk, Inge
7Oxygen, dissolvedDOml/lvan Dijk, Inge
8PercentagePerc%van Dijk, IngeLive, grown
9PercentagePerc%van Dijk, IngeLive, not grown
10PercentagePerc%van Dijk, IngeDead, grown
11PercentagePerc%van Dijk, IngeDead, not grown
12SurvivalSurvival%van Dijk, Inge
13PercentagePerc%van Dijk, IngeSpecimens grown
14Chamber numberChamber novan Dijk, Ingeaddition
15Number of specimensNo spec#van Dijk, Ingestart
16Number of specimensNo spec#van Dijk, Ingeend
17SalinitySalvan Dijk, Inge
18Temperature, waterTemp°Cvan Dijk, Inge
19Temperature, water, standard deviationTemp std dev±van Dijk, Inge
20Carbon, inorganic, dissolvedDICµmol/kgvan Dijk, Inge
21Carbon, inorganic, dissolved, standard deviationDIC std dev±van Dijk, Inge
22Alkalinity, totalATµmol/kgvan Dijk, IngePotentiometric titration
23Alkalinity, total, standard deviationAT std dev±van Dijk, IngePotentiometric titration
24Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmvan Dijk, IngeCalculated using CO2SYS
25Carbonate ion[CO3]2-µmol/kgvan Dijk, IngeCalculated using CO2SYS
26pHpHvan Dijk, IngeCalculated using CO2SYStotal scale
27Calcite saturation stateOmega Calvan Dijk, IngeCalculated using CO2SYS
28Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
30pH, standard deviationpH std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
31Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Carbon dioxide, standard deviationCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
33Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34Fugacity of carbon dioxide in seawater, standard deviationfCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
35Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
37Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38Bicarbonate ion, standard deviation[HCO3]- std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
39Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40Carbonate ion, standard deviation[CO3]2- std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
41Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42Aragonite saturation state, standard deviationOmega Arg std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
43Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
44Calcite saturation state, standard deviationOmega Cal std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
586 data points

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