Busch, Kathrin; Taboada, Sergi; Riesgo, Ana; Koutsouveli, Vasiliki; Rios, Pilar; Cristobo, Javier; Franke, Andre; Getzlaff, Klaus; Schmidt, Christina; Biastoch, Arne; Hentschel, Ute (2020): Metadata, flow cytometry data, and NCBI-Accession numbers (16S, 18S, COI, and SNP data) for fan-shaped sponges and seawater from the Cantabrian Sea in summer 2017 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.923271
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Abstract:
Connectivity is a fundamental process driving the persistence of marine populations and their adaptation potential in response to environmental change. In this study, we analysed the population genetics of two morphologically highly similar deep-sea sponge clades (Phakellia hirondellei and the 'Topsentia-and-Petromica (TaP)' clade) at three locations in the Cantabrian Sea. Sponge taxonomy was assessed by spicule analyses, as well as by 18S sequencing and COI sequencing. The corresponding host microbiome was analysed by 16S rRNA gene sequencing. In addition we set up an oceanographic modelling framework, for which we used seawater flow cytometry data (derived from bottom depths of CTD casts) as ground-truthing data.
Keyword(s):
Supplement to:
Busch, Kathrin; Taboada, Sergi; Riesgo, Ana; Koutsouveli, Vasiliki; Rios, Pilar; Cristobo, Javier; Franke, Andre; Getzlaff, Klaus; Schmidt, Christina; Biastoch, Arne; Hentschel, Ute (2021): Population connectivity of fan-shaped sponge holobionts in the deep Cantabrian Sea. Deep Sea Research Part I: Oceanographic Research Papers, 167, 103427, https://doi.org/10.1016/j.dsr.2020.103427
Project(s):
Funding:
Horizon 2020 (H2020), grant/award no. 679849: Deep-sea Sponge Grounds Ecosystems of the North Atlantic
Coverage:
Median Latitude: 43.993310 * Median Longitude: -5.513115 * South-bound Latitude: 43.772200 * West-bound Longitude: -6.473700 * North-bound Latitude: 44.421700 * East-bound Longitude: -4.637200
Date/Time Start: 2017-06-12T10:00:52 * Date/Time End: 2017-06-23T17:57:18
Minimum DEPTH, water: 303 m * Maximum DEPTH, water: 1522 m
Event(s):
SPONGES_0617_04-DR4 (DR4) * Latitude: 43.871900 * Longitude: -5.901800 * Date/Time: 2017-06-12T10:00:52 * Elevation: -695.0 m * Location: Bay of Biscay * Campaign: SponGES_0617 * Basis: Angeles Alvarino * Method/Device: Dredge, rock (DRG_R)
SPONGES_0617_07-CTD1 (CTD1) * Latitude: 43.918800 * Longitude: -6.265500 * Date/Time: 2017-06-13T11:30:31 * Elevation: -1172.0 m * Location: Bay of Biscay * Campaign: SponGES_0617 * Basis: Angeles Alvarino * Method/Device: CTD/Rosette (CTD-RO)
SPONGES_0617_12-CTD2 (CTD2) * Latitude: 43.776800 * Longitude: -6.203700 * Date/Time: 2017-06-14T11:04:40 * Elevation: -1152.0 m * Location: Bay of Biscay * Campaign: SponGES_0617 * Basis: Angeles Alvarino * Method/Device: CTD/Rosette (CTD-RO)
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Event label | Event | Busch, Kathrin | |||
| 2 | Sample code/label | Sample label | Busch, Kathrin | |||
| 3 | Sample ID | Sample ID | Busch, Kathrin | onboard | ||
| 4 | Date/Time of event | Date/Time | Busch, Kathrin | |||
| 5 | Latitude of event | Latitude | Busch, Kathrin | |||
| 6 | Longitude of event | Longitude | Busch, Kathrin | |||
| 7 | DEPTH, water | Depth water | m | Busch, Kathrin | Geocode | |
| 8 | Method/Device of event | Method/Device | Busch, Kathrin | |||
| 9 | Area/locality | Area | Busch, Kathrin | |||
| 10 | Geology, comment | Geo comm | Busch, Kathrin | geologic setting | ||
| 11 | Accession number, genetics | Access no gen | Busch, Kathrin | 16S | ||
| 12 | Accession number, genetics | Access no gen | Busch, Kathrin | 18S | ||
| 13 | Accession number, genetics | Access no gen | Busch, Kathrin | COI | ||
| 14 | Accession number, genetics | Access no gen | Busch, Kathrin | SNPs | ||
| 15 | Measurement conducted | Measurement | Busch, Kathrin | Spicule measurements | ||
| 16 | Measurement conducted | Measurement | Busch, Kathrin | sterol measurements | ||
| 17 | Measurement conducted | Measurement | Busch, Kathrin | microscopy_TEM | ||
| 18 | Bacteria | Bact | #/ml | Busch, Kathrin | Flow cytometry | |
| 19 | Phytoplankton | Phytopl | #/l | Busch, Kathrin | Flow cytometry |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Size:
550 data points